People
Projects: FungiNet total
Institutions: Friedrich-Schiller-University
Projects: FungiNet A - Aspergillus projects, FungiNet B - Bioinformatics projects, FungiNet C - Candida projects, FungiNet total, A1, Z1
Institutions: Friedrich Schiller University Jena, Institute of Microbiology, Dept. of Microbiology and Molecular Biology, Friedrich Schiller University Jena, Jena School for Microbial Communication, Leibniz-Institute for Natural Product Research and Infection Biology Hans Knöll Institute (HKI)
Projects: C2, FungiNet total, FungiNet C - Candida projects
Institutions: Friedrich-Schiller-University
Name
Prof. Dr. Thomas Dandekar
Position Professor and Chairman
Affiliation
Dept. of bioinformatics,
Biocenter
University of Würzburg
Am Hubland
97074 Würzburg
Phone 0931-318-4551
dandekar@biozentrum.uni-wuerzburg.de
Born 23.07.1960
Career 1979-1986 Studies in medicine at the Ludwig Maximilians University of Munich
1982-1986 MD, Max Planck Inst. of Psychiatry, Dept. Neuropharmacology, Martinsried
1987-1988 Post-Doc, Institute Pasteur, Paris
1988- now Scientist at the European Molecular Biology
...
Project C1
: inactive since 2020-06-01
Projects: FungiNet total, INF, A1, A2, A3, A4 (E), A5, A6, B1, B3 (E), B4, B5, C1, C2, C3, C4 (E), C5, C6 (E), Z1, Z2, FungiNet A - Aspergillus projects, FungiNet B - Bioinformatics projects, FungiNet C - Candida projects, B2
Institutions: Leibniz-Institute for Natural Product Research and Infection Biology Hans Knöll Institute (HKI)
https://orcid.org/0000-0001-6106-724X
Bioprocess data analysis (data mining)
Transcriptomics and proteomics data analysis and modelling
Gene Regulatory Network inference (Reverse engineering)
Decision making support systems in diagnostics, therapy and biotechnology
Head of the subgroup Stress and Immunoproteomics of the Department of Molecular and Applied Microbiology Department at the HKI
I study the analysis of high-throughput transcriptom and genome data.
For transcritom data (RNA-Seq, microarrays), I perform preprocessing and statistics to identify differentially expressed genes, as well as their functional analysis. My main focus is the analysis of transcriptom data
from human fungal pathogens in infection related conditions (f.e. nutrient limitation) as well as during the interaction with the host (dual RNA-seq).
Experimental data is used to set up mathematical models for
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Project leader C2
Automated analysis of microscopic image data of host-pathogen interaction
Projects: INF, FungiNet total, A1, A2, FungiNet A - Aspergillus projects, A3, A4 (E), A5, A6, FungiNet C - Candida projects, C1, C2, C3, C4 (E), C5, C6 (E), FungiNet B - Bioinformatics projects, B3 (E)
Institutions: HITS Heidelberger Institut für Theoretische Studien gGmbH
Within the de.NBI project my functions in the de.NBI-SysBio node comprise content curation, requirements elicitation, and community engagement for the users of biochemical reaction kinetics database SABIO-RK as well as of the data management platform SEEK.
Spatiotemporal Modeling and Simulation of Fungal Infection Processes
Principal investigator in B1.
Full professor in bioinformatics at FSU Jena
Projects: A1, A2, A3, A4 (E), A5, A6, B1, B2, B4, B5, C2, C1, C3, C4 (E), C5, C6 (E), FungiNet A - Aspergillus projects, FungiNet B - Bioinformatics projects, FungiNet C - Candida projects, FungiNet total, INF, Z1, Z2, B3 (E), A7
Institutions: Leibniz-Institute for Natural Product Research and Infection Biology Hans Knöll Institute (HKI)
https://orcid.org/0000-0003-3862-6546
Projects: FungiNet A - Aspergillus projects, FungiNet B - Bioinformatics projects, FungiNet C - Candida projects, FungiNet total, Z1
Institutions: Friedrich-Schiller-University, Friedrich Schiller University Jena, Jena School for Microbial Communication, Friedrich Schiller University Jena, Institute of Microbiology, Dept. of Microbiology and Molecular Biology, Leibniz-Institute for Natural Product Research and Infection Biology Hans Knöll Institute (HKI)
Management SFB FungiNet
Projects: A2, FungiNet total
Institutions: Julius Maximilians University Würzburg, Department of Internal Medicine II
Doktorandin
Rolle von CD56 in der Interaktion von Natürlichen Killerzellen mit Aspergillus fumigatus
Interaktionsanalysen von humanen Dendritischen Zellen und natürlichen Killerzellen bei der Konfrontation mit Aspergillus fumigatus
Projects: FungiNet total, INF, A1, A2, A3, A4 (E), A5, A6, B1, B2, B3 (E), B4, B5, C1, C2, C3, C4 (E), C5, C6 (E), FungiNet A - Aspergillus projects, FungiNet B - Bioinformatics projects, FungiNet C - Candida projects, Z1, Z2
Institutions: Leibniz-Institute for Natural Product Research and Infection Biology Hans Knöll Institute (HKI)
