The FungiNet SEEK

7 items tagged with 'R'.

People (7)

Projects: B1, B2, FungiNet B - Bioinformatics projects, FungiNet total

Institutions: Julius Maximilians University Würzburg, Biocenter, Department of Bioinformatics

Expertise: Integrative Data Analysis, Proteomics, Lichtheimia corymbifera, Data Management, protein-protein interaction, Host-Pathogen Interaction, Aspergillus fumigatus, Bioinformatics, Candida albicans

Tools: Python, Java, Phosphoproteomics, Transcriptomics, R, JavaScript, Network analysis, Proteomics, MySQL, PHP

Sascha Schäuble

Projects: A1, A2, A3, A4 (E), A5, A6, B1, B2, B4, B5, C2, C1, C3, C4 (E), C5, C6 (E), FungiNet A - Aspergillus projects, FungiNet B - Bioinformatics projects, FungiNet C - Candida projects, FungiNet total, INF, Z1, Z2, B3 (E)

Institutions: Leibniz-Institute for Natural Product Research and Infection Biology Hans Knöll Institute (HKI)

https://orcid.org/0000-0003-3862-6546

Expertise: Systems Biology, Bioinformatics, Metabolic networks

Tools: Matlab, Copasi, R, Python

Peter Großmann

Projects: FungiNet total, INF, A1, A2, A3, A4 (E), A5, A6, B1, B3 (E), B4, B5, C1, C2, C3, C4 (E), C5, C6 (E), Z1, Z2, FungiNet A - Aspergillus projects, FungiNet B - Bioinformatics projects, FungiNet C - Candida projects, B2

Institutions: Leibniz-Institute for Natural Product Research and Infection Biology Hans Knöll Institute (HKI)

https://orcid.org/0000-0001-6106-724X

Expertise: DNA supercoiling, Machine Learning, Bioinformatics, Metabolic networks, Integrative Data Analysis, Transcriptional Regulation

Tools: Systems biological modelling, R, LaTeX, Matlab

Jan Ewald

Projects: B2, FungiNet total, B1

Institutions: Friedrich Schiller University Jena, Department of Bioinformatics, School for Biology and Pharmacy, Julius Maximilians University Würzburg, Biocenter, Department of Bioinformatics

https://orcid.org/0000-0002-9415-2317

Roles: PhD Student, Postdoc

Expertise: Metabolic networks, Mathematical Modelling, Systems Biology

Tools: Python, R, LaTeX, Systems biological modelling, Matlab

Thomas Wolf

Projects: FungiNet total, INF, A1, A2, A3, A4 (E), A5, A6, B1, B2, B3 (E), B4, B5, C1, C2, C3, C4 (E), C5, C6 (E), FungiNet A - Aspergillus projects, FungiNet B - Bioinformatics projects, FungiNet C - Candida projects, Z1, Z2

Institutions: Leibniz-Institute for Natural Product Research and Infection Biology Hans Knöll Institute (HKI)

Roles: Postdoc

Expertise: Bioinformatics, Integrative Data Analysis, Gene Clusters, Data Management, Transcriptional Regulation, Gene Regulatory Network Inference, Secondary Metabolites

Tools: LaTeX, R, CASSIS, MEME, Python, SMIPS, FIMO, Perl, antiSMASH

Reinhard Guthke

Projects: FungiNet total, FungiNet B - Bioinformatics projects, FungiNet A - Aspergillus projects, B3 (E), FungiNet C - Candida projects, C5

Institutions: Leibniz-Institute for Natural Product Research and Infection Biology Hans Knöll Institute (HKI)

Expertise: Integrative Data Analysis, Mathematical Modelling, Gene Regulatory Network Inference

Tools: Matlab, R, ODE

Bioprocess data analysis (data mining)
Transcriptomics and proteomics data analysis and modelling
Gene Regulatory Network inference (Reverse engineering)
Decision making support systems in diagnostics, therapy and biotechnology