The FungiNet SEEK

7 items tagged with 'R'.

People (7)

Projects: B1, B2, FungiNet B - Bioinformatics projects, FungiNet total

Institutions: Julius Maximilians University Würzburg, Biocenter, Department of Bioinformatics

Expertise: Data Management, protein-protein interaction, Integrative Data Analysis, Proteomics, Lichtheimia corymbifera, Candida albicans, Host-Pathogen Interaction, Aspergillus fumigatus, Bioinformatics

Tools: Proteomics, MySQL, PHP, Python, Java, Phosphoproteomics, Transcriptomics, R, JavaScript, Network analysis

Sascha Schäuble

Projects: A1, A2, A3, A4 (E), A5, A6, B1, B2, B4, B5, C2, C1, C3, C4 (E), C5, C6 (E), FungiNet A - Aspergillus projects, FungiNet B - Bioinformatics projects, FungiNet C - Candida projects, FungiNet total, INF, Z1, Z2, B3 (E), A7

Institutions: Leibniz-Institute for Natural Product Research and Infection Biology Hans Knöll Institute (HKI)

https://orcid.org/0000-0003-3862-6546

Expertise: Metabolic networks, Systems Biology, Bioinformatics

Tools: Python, Matlab, Copasi, R

Peter Großmann

Projects: FungiNet total, INF, A1, A2, A3, A4 (E), A5, A6, B1, B3 (E), B4, B5, C1, C2, C3, C4 (E), C5, C6 (E), Z1, Z2, FungiNet A - Aspergillus projects, FungiNet B - Bioinformatics projects, FungiNet C - Candida projects, B2

Institutions: Leibniz-Institute for Natural Product Research and Infection Biology Hans Knöll Institute (HKI)

https://orcid.org/0000-0001-6106-724X

Expertise: Machine Learning, DNA supercoiling, Metabolic networks, Integrative Data Analysis, Transcriptional Regulation, Bioinformatics

Tools: Systems biological modelling, LaTeX, Matlab, R

Jan Ewald

Projects: B2, FungiNet total, B1

Institutions: Friedrich Schiller University Jena, Department of Bioinformatics, School for Biology and Pharmacy, Julius Maximilians University Würzburg, Biocenter, Department of Bioinformatics

https://orcid.org/0000-0002-9415-2317

Roles: PhD Student, Postdoc

Expertise: Metabolic networks, Systems Biology, Mathematical Modelling

Tools: LaTeX, Python, R, Matlab, Systems biological modelling

Thomas Wolf

Projects: FungiNet total, INF, A1, A2, A3, A4 (E), A5, A6, B1, B2, B3 (E), B4, B5, C1, C2, C3, C4 (E), C5, C6 (E), FungiNet A - Aspergillus projects, FungiNet B - Bioinformatics projects, FungiNet C - Candida projects, Z1, Z2

Institutions: Leibniz-Institute for Natural Product Research and Infection Biology Hans Knöll Institute (HKI)

Roles: Postdoc

Expertise: Gene Regulatory Network Inference, Secondary Metabolites, Bioinformatics, Integrative Data Analysis, Gene Clusters, Data Management, Transcriptional Regulation

Tools: LaTeX, Perl, antiSMASH, R, CASSIS, MEME, Python, SMIPS, FIMO

Reinhard Guthke

Projects: FungiNet total, FungiNet B - Bioinformatics projects, FungiNet A - Aspergillus projects, B3 (E), FungiNet C - Candida projects, C5

Institutions: Leibniz-Institute for Natural Product Research and Infection Biology Hans Knöll Institute (HKI)

Expertise: Gene Regulatory Network Inference, Integrative Data Analysis, Mathematical Modelling

Tools: R, Matlab, ODE

Bioprocess data analysis (data mining)
Transcriptomics and proteomics data analysis and modelling
Gene Regulatory Network inference (Reverse engineering)
Decision making support systems in diagnostics, therapy and biotechnology