Template_RNA-seq_V1.9
View samplesTemplate
Attributes
| Name | Type | Description | PID  | Unit |
|---|---|---|---|---|
| Source: Specimen* | String | Not specified | - | - |
| Source: Material Type | String | Not specified | - | - |
| Source: Organism | String | Not specified | - | - |
| Source: Strain or Line | String | Not specified | - | - |
| Source: Organism Part | String | Not specified | - | - |
| Source: OrganismStatus | String | Not specified | - | - |
| Source: Number of fungal organisms | Integer | Not specified | - | - |
| Source: Unit for number of fungi | String | Not specified | - | - |
| Source: Sex (e.g. for mice) | String | Not specified | - | - |
| Source: Age | Real number | Not specified | - | - |
| Source: Age Time Unit | String | Not specified | - | - |
| Source: Sampling Time Point | Real number | Not specified | - | - |
| Source: Sampling Time Point Unit | String | Not specified | - | - |
| Source: Temperature | Real number | Not specified | - | - |
| Source: Temperature Unit | String | Not specified | - | - |
| Source: pH | Real number | Not specified | - | - |
| Source: Atmosphere | String | Not specified | - | - |
| Source: Compound | String | Not specified | - | - |
| Source: Media | String | Not specified | - | - |
| Source: Nutrients | String | Not specified | - | - |
| Source: Storage Protocol | String | Not specified | - | - |
| Source: Storage Date | Date | Not specified | - | - |
| Source: Storage Location | String | Not specified | - | - |
| RNA Extraction: Extraction Protocol | String | Not specified | - | - |
| RNA Extraction: Extract Name | String | Not specified | - | - |
| RNA Extraction: 260/280 | Real number | Not specified | - | - |
| RNA Extraction: 230/280 | Real number | Not specified | - | - |
| RNA Extraction: RIN/RNA integrity number | Real number | Not specified | - | - |
| RNA Extraction: Concentration | Real number | Not specified | - | - |
| RNA Extraction: Concentration Unit | String | Not specified | - | - |
| RNA Extraction: Volume | Real number | Not specified | - | - |
| RNA Extraction: Volume Unit | String | Not specified | - | - |
| RNA Extraction: Extraction Kit | String | Not specified | - | - |
| RNA Extraction: Material Type | String | Not specified | - | - |
| RNA Extraction: Extraction Date | Date | Not specified | - | - |
| RNA Extraction: Storage Protocol | String | Not specified | - | - |
| RNA Extraction: Storage Date | Date | Not specified | - | - |
| RNA Extraction: Storage Location | String | Not specified | - | - |
| Sequencing: Sequencing Protocol | String | Not specified | - | - |
| Sequencing: Assay Name | String | Not specified | - | - |
| Sequencing: Sequencing Performer | String | Not specified | - | - |
| Sequencing: Technology Type | String | Not specified | - | - |
| Sequencing: Read Length | Integer | Not specified | - | - |
| Sequencing: Sequencing Instrument | String | Not specified | - | - |
| Sequencing: Library Source | String | Not specified | - | - |
| Sequencing: Library Strategy | Text | Not specified | - | - |
| Sequencing: Library Selection | String | Not specified | - | - |
| Sequencing: Library Layout | String | Not specified | - | - |
| Sequencing: Sequencing Date | Date | Not specified | - | - |
| Sequencing: Storage Protocol | String | Not specified | - | - |
| Sequencing: Storage Date | Date | Not specified | - | - |
| Sequencing: Storage Location | String | Not specified | - | - |
| Sequencing: Data File | Text | Not specified | - | - |
Tags
RNA-seq Creators and Submitter
Views: 1678
Created: 17th Aug 2017 at 17:24
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The yeast Candida albicans and the filamentous fungus Aspergillus fumigatus are by far the most important causes of life-threatening invasive mycoses in Europe. Despite the increasing incidence of these infections, the current diagnosis is still difficult and often too late, and options for therapies are limited. Moreover, A. fumigatus and C. albicans have developed multiple sophisticated, specific and unique pathogenicity mechanisms. Many of these mechanisms are not well understood. Research on ...
Projects: FungiNet total, FungiNet A - Aspergillus projects, FungiNet B - Bioinformatics projects, FungiNet C - Candida projects, INF, A1, A2, A3, A4 (E), A5, B1, B2, B3 (E), B4, C1, C2, C3, C4 (E), C5, C6 (E), Z2, Z1, B5, A6, A7, A8, C7
Web page: http://www.funginet.de/home.html
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