Samples

ID Title Source: Specimen Source: Material Type Source: Organism Source: Strain or Line Source: Organism Part Source: OrganismStatus Source: Number of fungal organisms Source: Unit for number of fungi Source: Sex (e.g. for mice) Source: Age Source: Age Time Unit Source: Sampling Time Point Source: Sampling Time Point Unit Source: Temperature Source: Temperature Unit Source: pH Source: Atmosphere Source: Compound Source: Media Source: Nutrients Source: Storage Protocol Source: Storage Date Source: Storage Location RNA Extraction: Extraction Protocol RNA Extraction: Extract Name RNA Extraction: 260/280 RNA Extraction: 230/280 RNA Extraction: RIN/RNA integrity number RNA Extraction: Concentration RNA Extraction: Concentration Unit RNA Extraction: Volume RNA Extraction: Volume Unit RNA Extraction: Extraction Kit RNA Extraction: Material Type RNA Extraction: Extraction Date RNA Extraction: Storage Protocol RNA Extraction: Storage Date RNA Extraction: Storage Location Sequencing: Sequencing Protocol Sequencing: Assay Name Sequencing: Sequencing Performer Sequencing: Technology Type Sequencing: Read Length Sequencing: Sequencing Instrument Sequencing: Library Source Sequencing: Library Strategy Sequencing: Library Selection Sequencing: Library Layout Sequencing: Sequencing Date Sequencing: Storage Protocol Sequencing: Storage Date Sequencing: Storage Location Sequencing: Data File
ID Title Source: Specimen Source: Material Type Source: Organism Source: Strain or Line Source: Organism Part Source: OrganismStatus Source: Number of fungal organisms Source: Unit for number of fungi Source: Sex (e.g. for mice) Source: Age Source: Age Time Unit Source: Sampling Time Point Source: Sampling Time Point Unit Source: Temperature Source: Temperature Unit Source: pH Source: Atmosphere Source: Compound Source: Media Source: Nutrients Source: Storage Protocol Source: Storage Date Source: Storage Location RNA Extraction: Extraction Protocol RNA Extraction: Extract Name RNA Extraction: 260/280 RNA Extraction: 230/280 RNA Extraction: RIN/RNA integrity number RNA Extraction: Concentration RNA Extraction: Concentration Unit RNA Extraction: Volume RNA Extraction: Volume Unit RNA Extraction: Extraction Kit RNA Extraction: Material Type RNA Extraction: Extraction Date RNA Extraction: Storage Protocol RNA Extraction: Storage Date RNA Extraction: Storage Location Sequencing: Sequencing Protocol Sequencing: Assay Name Sequencing: Sequencing Performer Sequencing: Technology Type Sequencing: Read Length Sequencing: Sequencing Instrument Sequencing: Library Source Sequencing: Library Strategy Sequencing: Library Selection Sequencing: Library Layout Sequencing: Sequencing Date Sequencing: Storage Protocol Sequencing: Storage Date Sequencing: Storage Location Sequencing: Data File
1 Af_0min+O2-A1 Af_0min+O2-A1 whole_organism Aspergillus fumigatus other conidia Not specified Not specified Not specified not applicable Not specified Not specified 0 minute(s) 37 degrees_C Not specified air none O2 saturation at 100% (≈260 µmol l-1) none NO STORAGE Not specified Not specified RNA EXTRACTION Af_0min+O2-A1 Not specified Not specified Not specified Not specified μg/ml Not specified μl RNA extraction kit total_RNA Not specified NO STORAGE Not specified Not specified SEQUENCING Af_0min+O2-A1 GATC Biotech Sequencing by synthesis (Illumina) Not specified Illumina HiSeq 2000 transcriptomic single end; poly-A filter random single Not specified STORAGE 24 July 2015 stored at HKI Backupserver /sbiarchiv/jlinde/A_fumigatus/Falk_Hillmann_2013_04/NG-6598_A1_lib20923_1519_6_1.fastq.gz
2 Af_15min-O2-A2 Af_15min-O2-A2 whole_organism Aspergillus fumigatus other conidia Not specified Not specified Not specified not applicable Not specified Not specified 15 minute(s) 37 degrees_C Not specified hypoxia none Not specified none NO STORAGE Not specified Not specified RNA EXTRACTION Af_15min-O2-A2 Not specified Not specified Not specified Not specified μg/ml Not specified μl RNA extraction kit total_RNA Not specified NO STORAGE Not specified Not specified SEQUENCING Af_15min-O2-A2 GATC Biotech Sequencing by synthesis (Illumina) Not specified Illumina HiSeq 2000 transcriptomic single end; poly-A filter random single Not specified STORAGE 24 July 2015 stored at HKI Backupserver /sbiarchiv/jlinde/A_fumigatus/Falk_Hillmann_2013_04/NG-6598_A2_lib20924_1519_6_1.fastq.gz
3 Af_30min-O2-A3 Af_30min-O2-A3 whole_organism Aspergillus fumigatus other conidia Not specified Not specified Not specified not applicable Not specified Not specified 30 minute(s) 37 degrees_C Not specified hypoxia none Not specified none NO STORAGE Not specified Not specified RNA EXTRACTION Af_30min-O2-A3 Not specified Not specified Not specified Not specified μg/ml Not specified μl RNA extraction kit total_RNA Not specified NO STORAGE Not specified Not specified SEQUENCING Af_30min-O2-A3 GATC Biotech Sequencing by synthesis (Illumina) Not specified Illumina HiSeq 2000 transcriptomic single end; poly-A filter random single Not specified STORAGE 24 July 2015 stored at HKI Backupserver /sbiarchiv/jlinde/A_fumigatus/Falk_Hillmann_2013_04/NG-6598_A3_lib20925_1519_6_1.fastq.gz
4 Af_15min+O2-A4(75min) Af_15min+O2-A4(75min) whole_organism Aspergillus fumigatus other conidia Not specified Not specified Not specified not applicable Not specified Not specified 75 minute(s) 37 degrees_C Not specified air none O2 saturation at 100% (≈260 µmol l-1) none NO STORAGE Not specified Not specified RNA EXTRACTION Af_15min+O2-A4 Not specified Not specified Not specified Not specified μg/ml Not specified μl RNA extraction kit total_RNA Not specified NO STORAGE Not specified Not specified SEQUENCING Af_15min+O2-A4 GATC Biotech Sequencing by synthesis (Illumina) Not specified Illumina HiSeq 2000 transcriptomic single end; poly-A filter random single Not specified STORAGE 24 July 2015 stored at HKI Backupserver /sbiarchiv/jlinde/A_fumigatus/Falk_Hillmann_2013_04/NG-6598_A4_lib20926_1519_6_1.fastq.gz
5 Af_0min+O2-B1 Af_0min+O2-B1 whole_organism Aspergillus fumigatus other conidia Not specified Not specified Not specified not applicable Not specified Not specified 0 minute(s) 37 degrees_C Not specified air none O2 saturation at 100% (≈260 µmol l-1) none NO STORAGE Not specified Not specified RNA EXTRACTION Af_0min+O2-B1 Not specified Not specified Not specified Not specified μg/ml Not specified μl RNA extraction kit total_RNA Not specified NO STORAGE Not specified Not specified SEQUENCING Af_0min+O2-B1 GATC Biotech Sequencing by synthesis (Illumina) Not specified Illumina HiSeq 2000 transcriptomic single end; poly-A filter random single Not specified STORAGE 24 July 2015 stored at HKI Backupserver /sbiarchiv/jlinde/A_fumigatus/Falk_Hillmann_2013_04/NG-6598_B1_lib20927_1519_6_1.fastq.gz
6 Af_15min-O2-B2 Af_15min-O2-B2 whole_organism Aspergillus fumigatus other conidia Not specified Not specified Not specified not applicable Not specified Not specified 15 minute(s) 37 degrees_C Not specified hypoxia none Not specified none NO STORAGE Not specified Not specified RNA EXTRACTION Af_15min-O2-B2 Not specified Not specified Not specified Not specified μg/ml Not specified μl RNA extraction kit total_RNA Not specified NO STORAGE Not specified Not specified SEQUENCING Af_15min-O2-B2 GATC Biotech Sequencing by synthesis (Illumina) Not specified Illumina HiSeq 2000 transcriptomic single end; poly-A filter random single Not specified STORAGE 24 July 2015 stored at HKI Backupserver /sbiarchiv/jlinde/A_fumigatus/Falk_Hillmann_2013_04/NG-6598_B2_lib20928_1519_6_1.fastq.gz
7 Af_30min-O2-B3 Af_30min-O2-B3 whole_organism Aspergillus fumigatus other conidia Not specified Not specified Not specified not applicable Not specified Not specified 30 minute(s) 37 degrees_C Not specified hypoxia none Not specified none NO STORAGE Not specified Not specified RNA EXTRACTION Af_30min-O2-B3 Not specified Not specified Not specified Not specified μg/ml Not specified μl RNA extraction kit total_RNA Not specified NO STORAGE Not specified Not specified SEQUENCING Af_30min-O2-B3 GATC Biotech Sequencing by synthesis (Illumina) Not specified Illumina HiSeq 2000 transcriptomic single end; poly-A filter random single Not specified STORAGE 24 July 2015 stored at HKI Backupserver /sbiarchiv/jlinde/A_fumigatus/Falk_Hillmann_2013_04/NG-6598_B3_lib20929_1519_6_1.fastq.gz
8 Af_15min+O2-B4(75min) Af_15min+O2-B4(75min) whole_organism Aspergillus fumigatus other conidia Not specified Not specified Not specified not applicable Not specified Not specified 75 minute(s) 37 degrees_C Not specified air none O2 saturation at 100% (≈260 µmol l-1) none NO STORAGE Not specified Not specified RNA EXTRACTION Af_15min+O2-B4 Not specified Not specified Not specified Not specified μg/ml Not specified μl RNA extraction kit total_RNA Not specified NO STORAGE Not specified Not specified SEQUENCING Af_15min+O2-B4 GATC Biotech Sequencing by synthesis (Illumina) Not specified Illumina HiSeq 2000 transcriptomic single end; poly-A filter random single Not specified STORAGE 24 July 2015 stored at HKI Backupserver /sbiarchiv/jlinde/A_fumigatus/Falk_Hillmann_2013_04/NG-6598_B4_lib22207_1546_7_1.fastq.gz
9 Af_0min+O2-C1 Af_0min+O2-C1 whole_organism Aspergillus fumigatus other conidia Not specified Not specified Not specified not applicable Not specified Not specified 0 minute(s) 37 degrees_C Not specified air none O2 saturation at 100% (≈260 µmol l-1) none NO STORAGE Not specified Not specified RNA EXTRACTION Af_0min+O2-C1 Not specified Not specified Not specified Not specified μg/ml Not specified μl RNA extraction kit total_RNA Not specified NO STORAGE Not specified Not specified SEQUENCING Af_0min+O2-C1 GATC Biotech Sequencing by synthesis (Illumina) Not specified Illumina HiSeq 2000 transcriptomic single end; poly-A filter random single Not specified STORAGE 24 July 2015 stored at HKI Backupserver /sbiarchiv/jlinde/A_fumigatus/Falk_Hillmann_2013_04/NG-6598_C1_lib20931_1519_6_1.fastq.gz
10 Af_15min-O2-C2 Af_15min-O2-C2 whole_organism Aspergillus fumigatus other conidia Not specified Not specified Not specified not applicable Not specified Not specified 15 minute(s) 37 degrees_C Not specified hypoxia none Not specified none NO STORAGE Not specified Not specified RNA EXTRACTION Af_15min-O2-C2 Not specified Not specified Not specified Not specified μg/ml Not specified μl RNA extraction kit total_RNA Not specified NO STORAGE Not specified Not specified SEQUENCING Af_15min-O2-C2 GATC Biotech Sequencing by synthesis (Illumina) Not specified Illumina HiSeq 2000 transcriptomic single end; poly-A filter random single Not specified STORAGE 24 July 2015 stored at HKI Backupserver /sbiarchiv/jlinde/A_fumigatus/Falk_Hillmann_2013_04/NG-6598_C2_lib20932_1519_6_1.fastq.gz
11 Af_30min-O2-C3 Af_30min-O2-C3 whole_organism Aspergillus fumigatus other conidia Not specified Not specified Not specified not applicable Not specified Not specified 30 minute(s) 37 degrees_C Not specified hypoxia none Not specified none NO STORAGE Not specified Not specified RNA EXTRACTION Af_30min-O2-C3 Not specified Not specified Not specified Not specified μg/ml Not specified μl RNA extraction kit total_RNA Not specified NO STORAGE Not specified Not specified SEQUENCING Af_30min-O2-C3 GATC Biotech Sequencing by synthesis (Illumina) Not specified Illumina HiSeq 2000 transcriptomic single end; poly-A filter random single Not specified STORAGE 24 July 2015 stored at HKI Backupserver /sbiarchiv/jlinde/A_fumigatus/Falk_Hillmann_2013_04/NG-6598_C3_lib20933_1519_6_1.fastq.gz
12 Af_15min+O2-C4(75min) Af_15min+O2-C4(75min) whole_organism Aspergillus fumigatus other conidia Not specified Not specified Not specified not applicable Not specified Not specified 75 minute(s) 37 degrees_C Not specified air none O2 saturation at 100% (≈260 µmol l-1) none NO STORAGE Not specified Not specified RNA EXTRACTION Af_15min+O2-C4 Not specified Not specified Not specified Not specified μg/ml Not specified μl RNA extraction kit total_RNA Not specified NO STORAGE Not specified Not specified SEQUENCING Af_15min+O2-C4 GATC Biotech Sequencing by synthesis (Illumina) Not specified Illumina HiSeq 2000 transcriptomic single end; poly-A filter random single Not specified STORAGE 24 July 2015 stored at HKI Backupserver /sbiarchiv/jlinde/A_fumigatus/Falk_Hillmann_2013_04/NG-6598_C4_lib20934_1533_5_1.fastq.gz
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