Showing for Sample Type: Template_RNA-seq_V1.9
12 Samples visible to you, out of a total of 440
ID | Title | Source: Specimen | Source: Material Type | Source: Organism | Source: Strain or Line | Source: Organism Part | Source: OrganismStatus | Source: Number of fungal organisms | Source: Unit for number of fungi | Source: Sex (e.g. for mice) | Source: Age | Source: Age Time Unit | Source: Sampling Time Point | Source: Sampling Time Point Unit | Source: Temperature | Source: Temperature Unit | Source: pH | Source: Atmosphere | Source: Compound | Source: Media | Source: Nutrients | Source: Storage Protocol | Source: Storage Date | Source: Storage Location | RNA Extraction: Extraction Protocol | RNA Extraction: Extract Name | RNA Extraction: 260/280 | RNA Extraction: 230/280 | RNA Extraction: RIN/RNA integrity number | RNA Extraction: Concentration | RNA Extraction: Concentration Unit | RNA Extraction: Volume | RNA Extraction: Volume Unit | RNA Extraction: Extraction Kit | RNA Extraction: Material Type | RNA Extraction: Extraction Date | RNA Extraction: Storage Protocol | RNA Extraction: Storage Date | RNA Extraction: Storage Location | Sequencing: Sequencing Protocol | Sequencing: Assay Name | Sequencing: Sequencing Performer | Sequencing: Technology Type | Sequencing: Read Length | Sequencing: Sequencing Instrument | Sequencing: Library Source | Sequencing: Library Strategy | Sequencing: Library Selection | Sequencing: Library Layout | Sequencing: Sequencing Date | Sequencing: Storage Protocol | Sequencing: Storage Date | Sequencing: Storage Location | Sequencing: Data File |
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ID | Title | Source: Specimen | Source: Material Type | Source: Organism | Source: Strain or Line | Source: Organism Part | Source: OrganismStatus | Source: Number of fungal organisms | Source: Unit for number of fungi | Source: Sex (e.g. for mice) | Source: Age | Source: Age Time Unit | Source: Sampling Time Point | Source: Sampling Time Point Unit | Source: Temperature | Source: Temperature Unit | Source: pH | Source: Atmosphere | Source: Compound | Source: Media | Source: Nutrients | Source: Storage Protocol | Source: Storage Date | Source: Storage Location | RNA Extraction: Extraction Protocol | RNA Extraction: Extract Name | RNA Extraction: 260/280 | RNA Extraction: 230/280 | RNA Extraction: RIN/RNA integrity number | RNA Extraction: Concentration | RNA Extraction: Concentration Unit | RNA Extraction: Volume | RNA Extraction: Volume Unit | RNA Extraction: Extraction Kit | RNA Extraction: Material Type | RNA Extraction: Extraction Date | RNA Extraction: Storage Protocol | RNA Extraction: Storage Date | RNA Extraction: Storage Location | Sequencing: Sequencing Protocol | Sequencing: Assay Name | Sequencing: Sequencing Performer | Sequencing: Technology Type | Sequencing: Read Length | Sequencing: Sequencing Instrument | Sequencing: Library Source | Sequencing: Library Strategy | Sequencing: Library Selection | Sequencing: Library Layout | Sequencing: Sequencing Date | Sequencing: Storage Protocol | Sequencing: Storage Date | Sequencing: Storage Location | Sequencing: Data File |
1 | Af_0min+O2-A1 | Af_0min+O2-A1 | whole_organism | Aspergillus fumigatus | other | conidia | Not specified | Not specified | Not specified | not applicable | Not specified | Not specified | 0 | minute(s) | 37 | degrees_C | Not specified | air | none | O2 saturation at 100% (≈260 µmol l-1) | none | NO STORAGE | Not specified | Not specified | RNA EXTRACTION | Af_0min+O2-A1 | Not specified | Not specified | Not specified | Not specified | μg/ml | Not specified | μl | RNA extraction kit | total_RNA | Not specified | NO STORAGE | Not specified | Not specified | SEQUENCING | Af_0min+O2-A1 | GATC Biotech | Sequencing by synthesis (Illumina) | Not specified | Illumina HiSeq 2000 | transcriptomic | single end; poly-A filter | random | single | Not specified | STORAGE | 24 July 2015 | stored at HKI Backupserver | /sbiarchiv/jlinde/A_fumigatus/Falk_Hillmann_2013_04/NG-6598_A1_lib20923_1519_6_1.fastq.gz |
2 | Af_15min-O2-A2 | Af_15min-O2-A2 | whole_organism | Aspergillus fumigatus | other | conidia | Not specified | Not specified | Not specified | not applicable | Not specified | Not specified | 15 | minute(s) | 37 | degrees_C | Not specified | hypoxia | none | Not specified | none | NO STORAGE | Not specified | Not specified | RNA EXTRACTION | Af_15min-O2-A2 | Not specified | Not specified | Not specified | Not specified | μg/ml | Not specified | μl | RNA extraction kit | total_RNA | Not specified | NO STORAGE | Not specified | Not specified | SEQUENCING | Af_15min-O2-A2 | GATC Biotech | Sequencing by synthesis (Illumina) | Not specified | Illumina HiSeq 2000 | transcriptomic | single end; poly-A filter | random | single | Not specified | STORAGE | 24 July 2015 | stored at HKI Backupserver | /sbiarchiv/jlinde/A_fumigatus/Falk_Hillmann_2013_04/NG-6598_A2_lib20924_1519_6_1.fastq.gz |
3 | Af_30min-O2-A3 | Af_30min-O2-A3 | whole_organism | Aspergillus fumigatus | other | conidia | Not specified | Not specified | Not specified | not applicable | Not specified | Not specified | 30 | minute(s) | 37 | degrees_C | Not specified | hypoxia | none | Not specified | none | NO STORAGE | Not specified | Not specified | RNA EXTRACTION | Af_30min-O2-A3 | Not specified | Not specified | Not specified | Not specified | μg/ml | Not specified | μl | RNA extraction kit | total_RNA | Not specified | NO STORAGE | Not specified | Not specified | SEQUENCING | Af_30min-O2-A3 | GATC Biotech | Sequencing by synthesis (Illumina) | Not specified | Illumina HiSeq 2000 | transcriptomic | single end; poly-A filter | random | single | Not specified | STORAGE | 24 July 2015 | stored at HKI Backupserver | /sbiarchiv/jlinde/A_fumigatus/Falk_Hillmann_2013_04/NG-6598_A3_lib20925_1519_6_1.fastq.gz |
4 | Af_15min+O2-A4(75min) | Af_15min+O2-A4(75min) | whole_organism | Aspergillus fumigatus | other | conidia | Not specified | Not specified | Not specified | not applicable | Not specified | Not specified | 75 | minute(s) | 37 | degrees_C | Not specified | air | none | O2 saturation at 100% (≈260 µmol l-1) | none | NO STORAGE | Not specified | Not specified | RNA EXTRACTION | Af_15min+O2-A4 | Not specified | Not specified | Not specified | Not specified | μg/ml | Not specified | μl | RNA extraction kit | total_RNA | Not specified | NO STORAGE | Not specified | Not specified | SEQUENCING | Af_15min+O2-A4 | GATC Biotech | Sequencing by synthesis (Illumina) | Not specified | Illumina HiSeq 2000 | transcriptomic | single end; poly-A filter | random | single | Not specified | STORAGE | 24 July 2015 | stored at HKI Backupserver | /sbiarchiv/jlinde/A_fumigatus/Falk_Hillmann_2013_04/NG-6598_A4_lib20926_1519_6_1.fastq.gz |
5 | Af_0min+O2-B1 | Af_0min+O2-B1 | whole_organism | Aspergillus fumigatus | other | conidia | Not specified | Not specified | Not specified | not applicable | Not specified | Not specified | 0 | minute(s) | 37 | degrees_C | Not specified | air | none | O2 saturation at 100% (≈260 µmol l-1) | none | NO STORAGE | Not specified | Not specified | RNA EXTRACTION | Af_0min+O2-B1 | Not specified | Not specified | Not specified | Not specified | μg/ml | Not specified | μl | RNA extraction kit | total_RNA | Not specified | NO STORAGE | Not specified | Not specified | SEQUENCING | Af_0min+O2-B1 | GATC Biotech | Sequencing by synthesis (Illumina) | Not specified | Illumina HiSeq 2000 | transcriptomic | single end; poly-A filter | random | single | Not specified | STORAGE | 24 July 2015 | stored at HKI Backupserver | /sbiarchiv/jlinde/A_fumigatus/Falk_Hillmann_2013_04/NG-6598_B1_lib20927_1519_6_1.fastq.gz |
6 | Af_15min-O2-B2 | Af_15min-O2-B2 | whole_organism | Aspergillus fumigatus | other | conidia | Not specified | Not specified | Not specified | not applicable | Not specified | Not specified | 15 | minute(s) | 37 | degrees_C | Not specified | hypoxia | none | Not specified | none | NO STORAGE | Not specified | Not specified | RNA EXTRACTION | Af_15min-O2-B2 | Not specified | Not specified | Not specified | Not specified | μg/ml | Not specified | μl | RNA extraction kit | total_RNA | Not specified | NO STORAGE | Not specified | Not specified | SEQUENCING | Af_15min-O2-B2 | GATC Biotech | Sequencing by synthesis (Illumina) | Not specified | Illumina HiSeq 2000 | transcriptomic | single end; poly-A filter | random | single | Not specified | STORAGE | 24 July 2015 | stored at HKI Backupserver | /sbiarchiv/jlinde/A_fumigatus/Falk_Hillmann_2013_04/NG-6598_B2_lib20928_1519_6_1.fastq.gz |
7 | Af_30min-O2-B3 | Af_30min-O2-B3 | whole_organism | Aspergillus fumigatus | other | conidia | Not specified | Not specified | Not specified | not applicable | Not specified | Not specified | 30 | minute(s) | 37 | degrees_C | Not specified | hypoxia | none | Not specified | none | NO STORAGE | Not specified | Not specified | RNA EXTRACTION | Af_30min-O2-B3 | Not specified | Not specified | Not specified | Not specified | μg/ml | Not specified | μl | RNA extraction kit | total_RNA | Not specified | NO STORAGE | Not specified | Not specified | SEQUENCING | Af_30min-O2-B3 | GATC Biotech | Sequencing by synthesis (Illumina) | Not specified | Illumina HiSeq 2000 | transcriptomic | single end; poly-A filter | random | single | Not specified | STORAGE | 24 July 2015 | stored at HKI Backupserver | /sbiarchiv/jlinde/A_fumigatus/Falk_Hillmann_2013_04/NG-6598_B3_lib20929_1519_6_1.fastq.gz |
8 | Af_15min+O2-B4(75min) | Af_15min+O2-B4(75min) | whole_organism | Aspergillus fumigatus | other | conidia | Not specified | Not specified | Not specified | not applicable | Not specified | Not specified | 75 | minute(s) | 37 | degrees_C | Not specified | air | none | O2 saturation at 100% (≈260 µmol l-1) | none | NO STORAGE | Not specified | Not specified | RNA EXTRACTION | Af_15min+O2-B4 | Not specified | Not specified | Not specified | Not specified | μg/ml | Not specified | μl | RNA extraction kit | total_RNA | Not specified | NO STORAGE | Not specified | Not specified | SEQUENCING | Af_15min+O2-B4 | GATC Biotech | Sequencing by synthesis (Illumina) | Not specified | Illumina HiSeq 2000 | transcriptomic | single end; poly-A filter | random | single | Not specified | STORAGE | 24 July 2015 | stored at HKI Backupserver | /sbiarchiv/jlinde/A_fumigatus/Falk_Hillmann_2013_04/NG-6598_B4_lib22207_1546_7_1.fastq.gz |
9 | Af_0min+O2-C1 | Af_0min+O2-C1 | whole_organism | Aspergillus fumigatus | other | conidia | Not specified | Not specified | Not specified | not applicable | Not specified | Not specified | 0 | minute(s) | 37 | degrees_C | Not specified | air | none | O2 saturation at 100% (≈260 µmol l-1) | none | NO STORAGE | Not specified | Not specified | RNA EXTRACTION | Af_0min+O2-C1 | Not specified | Not specified | Not specified | Not specified | μg/ml | Not specified | μl | RNA extraction kit | total_RNA | Not specified | NO STORAGE | Not specified | Not specified | SEQUENCING | Af_0min+O2-C1 | GATC Biotech | Sequencing by synthesis (Illumina) | Not specified | Illumina HiSeq 2000 | transcriptomic | single end; poly-A filter | random | single | Not specified | STORAGE | 24 July 2015 | stored at HKI Backupserver | /sbiarchiv/jlinde/A_fumigatus/Falk_Hillmann_2013_04/NG-6598_C1_lib20931_1519_6_1.fastq.gz |
10 | Af_15min-O2-C2 | Af_15min-O2-C2 | whole_organism | Aspergillus fumigatus | other | conidia | Not specified | Not specified | Not specified | not applicable | Not specified | Not specified | 15 | minute(s) | 37 | degrees_C | Not specified | hypoxia | none | Not specified | none | NO STORAGE | Not specified | Not specified | RNA EXTRACTION | Af_15min-O2-C2 | Not specified | Not specified | Not specified | Not specified | μg/ml | Not specified | μl | RNA extraction kit | total_RNA | Not specified | NO STORAGE | Not specified | Not specified | SEQUENCING | Af_15min-O2-C2 | GATC Biotech | Sequencing by synthesis (Illumina) | Not specified | Illumina HiSeq 2000 | transcriptomic | single end; poly-A filter | random | single | Not specified | STORAGE | 24 July 2015 | stored at HKI Backupserver | /sbiarchiv/jlinde/A_fumigatus/Falk_Hillmann_2013_04/NG-6598_C2_lib20932_1519_6_1.fastq.gz |
11 | Af_30min-O2-C3 | Af_30min-O2-C3 | whole_organism | Aspergillus fumigatus | other | conidia | Not specified | Not specified | Not specified | not applicable | Not specified | Not specified | 30 | minute(s) | 37 | degrees_C | Not specified | hypoxia | none | Not specified | none | NO STORAGE | Not specified | Not specified | RNA EXTRACTION | Af_30min-O2-C3 | Not specified | Not specified | Not specified | Not specified | μg/ml | Not specified | μl | RNA extraction kit | total_RNA | Not specified | NO STORAGE | Not specified | Not specified | SEQUENCING | Af_30min-O2-C3 | GATC Biotech | Sequencing by synthesis (Illumina) | Not specified | Illumina HiSeq 2000 | transcriptomic | single end; poly-A filter | random | single | Not specified | STORAGE | 24 July 2015 | stored at HKI Backupserver | /sbiarchiv/jlinde/A_fumigatus/Falk_Hillmann_2013_04/NG-6598_C3_lib20933_1519_6_1.fastq.gz |
12 | Af_15min+O2-C4(75min) | Af_15min+O2-C4(75min) | whole_organism | Aspergillus fumigatus | other | conidia | Not specified | Not specified | Not specified | not applicable | Not specified | Not specified | 75 | minute(s) | 37 | degrees_C | Not specified | air | none | O2 saturation at 100% (≈260 µmol l-1) | none | NO STORAGE | Not specified | Not specified | RNA EXTRACTION | Af_15min+O2-C4 | Not specified | Not specified | Not specified | Not specified | μg/ml | Not specified | μl | RNA extraction kit | total_RNA | Not specified | NO STORAGE | Not specified | Not specified | SEQUENCING | Af_15min+O2-C4 | GATC Biotech | Sequencing by synthesis (Illumina) | Not specified | Illumina HiSeq 2000 | transcriptomic | single end; poly-A filter | random | single | Not specified | STORAGE | 24 July 2015 | stored at HKI Backupserver | /sbiarchiv/jlinde/A_fumigatus/Falk_Hillmann_2013_04/NG-6598_C4_lib20934_1533_5_1.fastq.gz |