SEEK ID: https://funginet.hki-jena.de/people/37
Location: Germany
ORCID: Not specified
Joined: 21st Feb 2013
Expertise: Data Management, Integrative Data Analysis, Bioinformatics, Systems Biology, Statistics
Tools: Not specified
Related items
- Programmes (1)
- Projects (2)
- Institutions (1)
- Investigations (14+9)
- Studies (42+20)
- Assays (46+20)
- Data files (55+20)
- SOPs (0+1)
- Publications (4)
The yeast Candida albicans and the filamentous fungus Aspergillus fumigatus are by far the most important causes of life-threatening invasive mycoses in Europe. Despite the increasing incidence of these infections, the current diagnosis is still difficult and often too late, and options for therapies are limited. Moreover, A. fumigatus and C. albicans have developed multiple sophisticated, specific and unique pathogenicity mechanisms. Many of these mechanisms are not well understood. Research on ...
Projects: FungiNet total, FungiNet A - Aspergillus projects, FungiNet B - Bioinformatics projects, FungiNet C - Candida projects, INF, A1, A2, A3, A4 (E), A5, B1, B2, B3 (E), B4, C1, C2, C3, C4 (E), C5, C6 (E), Z2, Z1, B5, A6, A7, A8, C7
Web page: http://www.funginet.de/home.html
Integrated database for experimental data
Within the Collaborative Research Center / Transregio 124 “Pathogenic fungi and their human host: Networks of Interaction – FungiNet”, the INF project is responsible to analyse and share OMICS data. Databases help to foster the collaboration within FungiNet as an important point of the Collaborative Research Center. Therefore, we set-up two databases:
a) SEEK is a web-based platform to find, share and exchange unstructured data and knowledge, such as ...
In project Z2 a sophisticated proteome analysis platform will be provided based on 2D-gel electrophoresis (2D-GE), MALDI-TOF and LC-MS/MS techniques to specific A and Cprojects.
P Hortschansky, M Eisendle, Q Al-Abdallah, A D Schmidt, S Bergmann, M Thön, O Kniemeyer, B Abt, B Seeber, E R Werner, M Kato, A A Brakhage and H Haas. Interaction of HapX with the CCAAT-binding complex-a novel mechanism of gene regulation by iron. EMBO J. 2007 Jul 11;26(13):3157-68. Epub 2007 Jun 14
Snapshots: No snapshots
Wartenberg D, Vödisch M, Kniemeyer O, Albrecht-Eckardt D, Scherlach K, Winkler R, Weide M, Brakhage AA. Proteome analysis of the farnesol-induced stress response in Aspergillus nidulans-The role of a putative dehydrin. J Proteomics. 2012 May 23.
Submitter: Daniela Albrecht-Eckardt
Studies: Control, Farnesol Treatment, Internal Standard
Assays: Control gels, Farnesol gels, Standard gels
Snapshots: No snapshots
D Albrecht, R Guthke, A A Brakhage, O Kniemeyer. Integrative analysis of the heat shock response in Aspergillus fumigatus. BMC Genomics. 2010 Jan 15;11:32.
Find corresponding transcriptomic data at ArrayExpress: E-MEXP-332
Submitter: Daniela Albrecht-Eckardt
Studies: pooled standard, t=0, t=120, t=180, t=30, t=60
Assays: pooled standard gels, t0 gels, t120 gels, t180 gels, t30 gels, t60 gels
Snapshots: No snapshots
Dirk Wartenberg, Katrin Lapp, Ilse D. Jacobsen, Hans-Martin Dahse, Olaf Kniemeyer, Thorsten Heinekamp, Axel A. Brakhage Leibniz Institute for Natural Product Research and Infection Biology-Hans-Knoell-Institute (HKI), Jena, Germany. Secretome analysis of Aspergillus fumigatus reveals Asp-hemolysin as a major secreted protein. Int J Med Microbiol. 2011, Nov;301(7):602-11
Snapshots: No snapshots
Teutschbein J, Simon S, Lother J, Springer J, Hortschansky P, Morton CO, Löffler J, Einsele H, Conneally E, Rogers TR, Guthke R, Brakhage AA, Kniemeyer O. Proteomic profiling of serological responses to Aspergillus fumigatus antigens in patients with invasive aspergillosis. J Proteome Res 2016 Mar 24
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Aspergillus nidulans R21 was grown over night in AMM at 37°C and 200 rpm. The culture was treated with 50 µM farnesol or the same volume of ethanol without farnesol as control. The culture was harvested after 3 hours of further incubation.
Snapshots: No snapshots
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Submitter: Daniela Albrecht-Eckardt
Assay type: Experimental Assay Type
Technology type: 2D Gel Electrophoresis
Investigation: Proteome Map of Aspergillus fumigatus
Study: Conidia
Submitter: Daniela Albrecht-Eckardt
Assay type: Experimental Assay Type
Technology type: 2D Gel Electrophoresis
Investigation: Proteome Map of Aspergillus fumigatus
Study: Conidia
Submitter: Daniela Albrecht-Eckardt
Assay type: Experimental Assay Type
Technology type: 2D Gel Electrophoresis
Investigation: Proteome Map of Aspergillus fumigatus
Study: Conidia
Submitter: Daniela Albrecht-Eckardt
Assay type: Experimental Assay Type
Technology type: 2D Gel Electrophoresis
Investigation: Proteome Map of Aspergillus fumigatus
Study: Conidia
Submitter: Daniela Albrecht-Eckardt
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Proteome Map of Aspergillus fumigatus
Study: Mitochondrion
Organisms: No organisms
SOPs: No SOPs
Data files: Mastergel mitochondrion, mzData Mitochondria
Snapshots: No snapshots
Creator: Daniela Albrecht-Eckardt
Submitter: Daniela Albrecht-Eckardt
Creator: Daniela Albrecht-Eckardt
Submitter: Daniela Albrecht-Eckardt
Creator: Daniela Albrecht-Eckardt
Submitter: Daniela Albrecht-Eckardt
Creator: Daniela Albrecht-Eckardt
Submitter: Daniela Albrecht-Eckardt
Creator: Daniela Albrecht-Eckardt
Submitter: Daniela Albrecht-Eckardt
Abstract (Expand)
Authors: S. Ruben, E. Garbe, S. Mogavero, D. Albrecht-Eckardt, D. Hellwig, A. Hader, T. Kruger, K. Gerth, I. D. Jacobsen, O. Elshafee, S. Brunke, K. Hunniger, O. Kniemeyer, A. A. Brakhage, J. Morschhauser, B. Hube, S. Vylkova, O. Kurzai, R. Martin
Date Published: 28th Apr 2020
Publication Type: Not specified
PubMed ID: 32345638
Citation: mBio. 2020 Apr 28;11(2). pii: mBio.00206-20. doi: 10.1128/mBio.00206-20.
Abstract (Expand)
Authors: , J. Voigt, M. Bouzani, , , , , R. Martin, ,
Date Published: 19th May 2016
Publication Type: Not specified
PubMed ID: 27242763
Citation:
Abstract (Expand)
Authors: M. Bohringer, S. Pohlers, , , J. Piegsa, M. Weber, R. Martin, , , ,
Date Published: 12th Jan 2016
Publication Type: Not specified
PubMed ID: 26752615
Citation:
Abstract (Expand)
Authors: R. Martin, , S. Brunke, , ,
Date Published: 14th Mar 2013
Publication Type: Not specified
PubMed ID: 23516516
Citation: