People

Stefanie Dietrich : inactive since 2020-06-09

Projects: B4, FungiNet total, FungiNet B - Bioinformatics projects

Institutions: Leibniz-Institute for Natural Product Research and Infection Biology Hans Knöll Institute (HKI)

Roles: PhD Student

Expertise: Image analysis

Tools: Python, openCV

Marc Thilo Figge

Projects: FungiNet total, FungiNet B - Bioinformatics projects, B4

Institutions: Leibniz-Institute for Natural Product Research and Infection Biology Hans Knöll Institute (HKI), Friedrich-Schiller-University

https://orcid.org/0000-0002-4044-9166

Roles: Project Coordinator

Expertise: Image-based Systems Biology, Lichtheimia corymbifera, Candida albicans, Aspergillus fumigatus

Tools: Image analysis, Mathematical Modelling, Computational and theoretical biology

Peter Großmann

: inactive since 2020-06-01

Projects: FungiNet total, INF, A1, A2, A3, A4 (E), A5, A6, B1, B3 (E), B4, B5, C1, C2, C3, C4 (E), C5, C6 (E), Z1, Z2, FungiNet A - Aspergillus projects, FungiNet B - Bioinformatics projects, FungiNet C - Candida projects, B2

Institutions: Leibniz-Institute for Natural Product Research and Infection Biology Hans Knöll Institute (HKI)

https://orcid.org/0000-0001-6106-724X

Expertise: Machine Learning, DNA supercoiling, Metabolic networks, Integrative Data Analysis, Transcriptional Regulation, Bioinformatics

Tools: Systems biological modelling, LaTeX, Matlab, R

Kaswara Kraibooj : inactive since 2018-06-07

Projects: B4

Institutions: Leibniz-Institute for Natural Product Research and Infection Biology Hans Knöll Institute (HKI)

Projects: B4

Institutions: Leibniz-Institute for Natural Product Research and Infection Biology Hans Knöll Institute (HKI)

Jan-Philipp Praetorius

Projects: B4, FungiNet B - Bioinformatics projects, FungiNet total

Institutions: Leibniz-Institute for Natural Product Research and Infection Biology Hans Knöll Institute (HKI)

https://orcid.org/0000-0002-1828-8351

Roles: PhD Student

Tools: deep learning, Machine Learning, Image analysis

Automated analysis of microscopic image data of host-pathogen interaction

Projects: B4, FungiNet total

Institutions: Leibniz-Institute for Natural Product Research and Infection Biology Hans Knöll Institute (HKI)

Roles: PhD Student

Expertise: High Performance Computing

Tools: Mathematical Modelling, Finite Element Methode, Numerical Integration

Spatiotemporal Modeling and Simulation of Fungal Infection Processes

Sascha Schäuble

Projects: A1, A2, A3, A4 (E), A5, A6, B1, B2, B4, B5, C2, C1, C3, C4 (E), C5, C6 (E), FungiNet A - Aspergillus projects, FungiNet B - Bioinformatics projects, FungiNet C - Candida projects, FungiNet total, INF, Z1, Z2, B3 (E), A7

Institutions: Leibniz-Institute for Natural Product Research and Infection Biology Hans Knöll Institute (HKI)

https://orcid.org/0000-0003-3862-6546

Expertise: Bioinformatics, Metabolic networks, Systems Biology

Tools: R, Python, Matlab, Copasi

Carl-Magnus Svensson

Projects: B4, FungiNet C - Candida projects, FungiNet A - Aspergillus projects

Institutions: Leibniz-Institute for Natural Product Research and Infection Biology Hans Knöll Institute (HKI)

Roles: Postdoc

Projects: B4, FungiNet A - Aspergillus projects, FungiNet B - Bioinformatics projects, FungiNet C - Candida projects, FungiNet total

Institutions: Leibniz-Institute for Natural Product Research and Infection Biology Hans Knöll Institute (HKI)

: inactive since 2018-06-07

Projects: FungiNet total, INF, A1, A2, A3, A4 (E), A5, A6, B1, B2, B3 (E), B4, B5, C1, C2, C3, C4 (E), C5, C6 (E), FungiNet A - Aspergillus projects, FungiNet B - Bioinformatics projects, FungiNet C - Candida projects, Z1, Z2

Institutions: Leibniz-Institute for Natural Product Research and Infection Biology Hans Knöll Institute (HKI)

Roles: Postdoc

Expertise: Bioinformatics, Integrative Data Analysis, Gene Clusters, Data Management, Transcriptional Regulation, Gene Regulatory Network Inference, Secondary Metabolites

Tools: LaTeX, R, CASSIS, MEME, Python, SMIPS, FIMO, Perl, antiSMASH

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