People

Daniela Albrecht-Eckardt

Projects: INF, Z2

Institutions: BioControl Jena GmbH

Expertise: Statistics, Data Management, Integrative Data Analysis, Bioinformatics, Systems Biology

Amelia Barber

Projects: INF

Institutions: Leibniz-Institute for Natural Product Research and Infection Biology Hans Knöll Institute (HKI)

https://orcid.org/0000-0002-3399-1037

Peter Großmann

: inactive since 2020-06-01

Projects: FungiNet total, INF, A1, A2, A3, A4 (E), A5, A6, B1, B3 (E), B4, B5, C1, C2, C3, C4 (E), C5, C6 (E), Z1, Z2, FungiNet A - Aspergillus projects, FungiNet B - Bioinformatics projects, FungiNet C - Candida projects, B2

Institutions: Leibniz-Institute for Natural Product Research and Infection Biology Hans Knöll Institute (HKI)

https://orcid.org/0000-0001-6106-724X

Expertise: Machine Learning, DNA supercoiling, Metabolic networks, Integrative Data Analysis, Transcriptional Regulation, Bioinformatics

Tools: Systems biological modelling, LaTeX, Matlab, R

Jörg Linde : inactive since 2018-03-16

Projects: FungiNet A - Aspergillus projects, FungiNet B - Bioinformatics projects, FungiNet C - Candida projects, FungiNet total, INF

Institutions: Leibniz-Institute for Natural Product Research and Infection Biology Hans Knöll Institute (HKI)

Expertise: Host-Pathogen Interaction, Bioinformatics, Gene Regulatory Network Inference, Systems Biology, Integrative Data Analysis

Tools: Transcriptomics, Systems biological modelling, Proteomics, Genetic analysis, Genomics

I study the analysis of high-throughput transcriptom and genome data.

For transcritom data (RNA-Seq, microarrays), I perform preprocessing and statistics to identify differentially expressed genes, as well as their functional analysis. My main focus is the analysis of transcriptom data
from human fungal pathogens in infection related conditions (f.e. nutrient limitation) as well as during the interaction with the host (dual RNA-seq).
Experimental data is used to set up mathematical models for
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Wolfgang Müller

Projects: INF

Institutions: HITS Heidelberger Institut für Theoretische Studien gGmbH

Gianni Panagiotou

Projects: B5, FungiNet B - Bioinformatics projects, FungiNet total, INF

Institutions: Leibniz-Institute for Natural Product Research and Infection Biology Hans Knöll Institute (HKI)

Maja Rey

Projects: INF, FungiNet total, A1, A2, FungiNet A - Aspergillus projects, A3, A4 (E), A5, A6, FungiNet C - Candida projects, C1, C2, C3, C4 (E), C5, C6 (E), FungiNet B - Bioinformatics projects, B3 (E)

Institutions: HITS Heidelberger Institut für Theoretische Studien gGmbH

Expertise: Biochemistry, Phytopathology, Molecular Biology, Data Curation, Microbiology, Data Management

Tools: SABIO-RK, Seek

Within the de.NBI project my functions in the de.NBI-SysBio node comprise content curation, requirements elicitation, and community engagement for the users of biochemical reaction kinetics database SABIO-RK as well as of the data management platform SEEK.

Wolfgang Schmidt-Heck : inactive since 2018-06-07