PhD Scholar at University of Delhi, New Delhi, India. My research interest revolves around Multi-omic investigation of resistance mechanism in fungal pathogens.
Projects: B1, B2, FungiNet B - Bioinformatics projects, FungiNet total
Institutions: Julius Maximilians University Würzburg, Biocenter, Department of Bioinformatics
Roles: PhD Student
Expertise: Proteomics, Lichtheimia corymbifera, Data Management, protein-protein interaction, Integrative Data Analysis, Aspergillus fumigatus, Bioinformatics, Candida albicans, Host-Pathogen Interaction
Tools: Phosphoproteomics, Transcriptomics, R, JavaScript, Network analysis, Proteomics, MySQL, PHP, Python, Java
Roles: Postdoc
Expertise: MALDI-MS Imaging, Proteomics
Tools: Cell and tissue culture, Cell biology, Image analysis
I am responisble for the spatial proteomics part in Z2. We provide a proteomic platform to study spatial changes of the proteome during host-fungal pathogen interaction using MALDI-MS Imaging and Lasermicrodissection. As type of biological sample we can work with cryo and formalin fixed tissue, as well as cell cultures and lysed sample solutions.
Please get into contact with me if you are interested in MALDI-MS Imaging for your research project.
Projects: FungiNet total, Z2
Institutions: Leibniz-Institute for Natural Product Research and Infection Biology Hans Knöll Institute (HKI)

Roles: Project Coordinator
Expertise: Aspergillus fumigatus, Hypoxia, Stress response, Proteomics
Tools: Proteomics, LC-MS/MS, 2D-gel electrophoresis
Head of the subgroup Stress and Immunoproteomics of the Department of Molecular and Applied Microbiology Department at the HKI
I study the analysis of high-throughput transcriptom and genome data.
For transcritom data (RNA-Seq, microarrays), I perform preprocessing and statistics to identify differentially expressed genes, as well as their functional analysis. My main focus is the analysis of transcriptom data
from human fungal pathogens in infection related conditions (f.e. nutrient limitation) as well as during the interaction with the host (dual RNA-seq).
Experimental data is used to set up mathematical models for
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Creators: Franziska Hoffmann, Daniela Pelzel
Contributor: Franziska Hoffmann
Investigations: No Investigations
Studies: No Studies
Assays: No Assays